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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927293.1_cds_XP_016475155.1_67110
CDS Infomation

[gene=LOC107796843] [db_xref=GeneID:107796843] [protein=ribosomal RNA small subunit methyltransferase, chloroplastic] [protein_id=XP_016475155.1] [location=join(14847..15095,15317..15466,15895..15951,16324..16425,17583..17678,39791..39875,40290..40342,40816..40899,41111..41221,41330..41395)] [gbkey=CDS]
Sequence

ATGCCTTGTTTGCTACATTCCCTGCTGCCTCTCTCTTCAACGCCAAAACCTCTACTCTTG
GCAAATTCGCCGGCGTACGATGGACCCGTTGGTTCCAATAGCCCAAGACCCAAATCCCAT
CATACAATAACTGCAATATCTAAAACCAAAAGCGAAACAAGAATCAATAACAAGGCTGAG
GATGACTATCATGCCACCCTTAAAGCTCTCAACTCTAAAGGTCGTTTCCCAAGAAAGTCA
CTTGGGCAGCATTACATGCTGAATTCGTCAGTGAATGAGGAACTAGTTGCTGCTGCTGAT
GTACAAGAAGGAGATTTGGTGGTTGAAATTGGGCCTGGTACTGGTTCACTGACCAATGTT
CTTGTAGACGCTGGTGCCACTGTCCTTGCTATTGAAAAGGATCCCTACATGGCAGCCCTT
GTAATGGAGAGATTTTCCAGTCTAGACCACGTAAAGGTTTTACAAGAGGATTTCACAAAA
TGTCATATACGCTCCCATTTGTCCACAATTTCGCATAGTGGAAGAGATTCTTCAGGTGTG
AAACCACAATATGCAAAGGTAGTCTCCAATTTACCTTTTAACATAAGTACAGAAGTAATT
AAGCAACTTCTTCCCATGGGTGATATTTTCTCAGAAATAGTTCTGTTACTCCAGGAGGAA
GCAGCTGTGCGCTTGGTGGATTCATCCTCAGGGTCCTCTGAGTATCGACCCATTAATATC
TTCATCAACTTCTATTCAGATCCTGAATACAGATTTAAGGTCCCAAGGACAAATTTCTTC
CCACAACCTAAAGTCGATGCAGCTGTAGTTTCCTTCAGACTGAAACAACCTGTAGATTAT
CCTCCTGTTTCTTCTGCCAAAAGCTTCTTCTCAATGGTCAATTCTGCTTTTAATGGAAAA
CGTAAGATGTTGCGAAAGACACTACAGCATATATGCCCTTCCCTTGAGATTGAAGAAGCT
CTTGTTAGTGCTGGTCTTCCACCCACGGCAAGGCCGGAGGAGCTAGCGCTAGAAGATTTT
GTAAGGCTGCATAATTCAATTGCTAAAGCCTAA

Peptide Sequence

PEP ID

XP_016475155.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase, chloroplastic [Nicotiana tabacum]
Sequence

MPCLLHSLLPLSSTPKPLLLANSPAYDGPVGSNSPRPKSHHTITAISKTKSETRINNKAE
DDYHATLKALNSKGRFPRKSLGQHYMLNSSVNEELVAAADVQEGDLVVEIGPGTGSLTNV
LVDAGATVLAIEKDPYMAALVMERFSSLDHVKVLQEDFTKCHIRSHLSTISHSGRDSSGV
KPQYAKVVSNLPFNISTEVIKQLLPMGDIFSEIVLLLQEEAAVRLVDSSSGSSEYRPINI
FINFYSDPEYRFKVPRTNFFPQPKVDAAVVSFRLKQPVDYPPVSSAKSFFSMVNSAFNGK
RKMLRKTLQHICPSLEIEEALVSAGLPPTARPEELALEDFVRLHNSIAKA

Transcript Sequence

Gene sequence data has not been registered.